Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_15780 | Not Available | Positive | 3706995 - 3707519 | 20441.6 |
| hypothetical protein | A5893_15785 | Not Available | Positive | 3707555 - 3707827 | 10415.7 |
| hypothetical protein | A5893_15790 | Not Available | Positive | 3707820 - 3708281 | 17990.8 |
| hypothetical protein | A5893_15795 | Not Available | Positive | 3708288 - 3709043 | 27172.7 |
| hypothetical protein | A5893_15800 | Not Available | Positive | 3709066 - 3709599 | 20718.1 |
| electron transporter | A5893_15805 | Not Available | Positive | 3709571 - 3710224 | 25177.4 |
| transposase | A5893_15810 | Not Available | Positive | 3710714 - 3711244 | 21010.3 |
| 1-pyrroline-5-carboxylate dehydrogenase | A5893_15815 | Not Available | Negative | 3711450 - 3713084 | 60490.2 |
| hypothetical protein | A5893_15820 | Not Available | Positive | 3713250 - 3714032 | 29993.9 |
| methyltransferase type 11 | A5893_15825 | Not Available | Negative | 3714062 - 3714775 | 27043.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
