Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone h1 | A5893_15725 | Not Available | Positive | 3695259 - 3695432 | 6286.48 |
| dna starvation/stationary phase protection protein | A5893_15730 | Not Available | Positive | 3695787 - 3696263 | 18266.8 |
| cupin | A5893_15740 | Not Available | Positive | 3698340 - 3698756 | 15251.8 |
| hypothetical protein | A5893_15745 | Not Available | Negative | 3698803 - 3699171 | 13479.2 |
| abc transporter atp-binding protein | A5893_15750 | Not Available | Positive | 3699250 - 3701166 | 72652.5 |
| hypothetical protein | A5893_15755 | Not Available | Positive | 3701472 - 3702713 | 48055.0 |
| acyl-coa thioesterase | A5893_15760 | Not Available | Positive | 3702763 - 3703284 | 19258.2 |
| dihydrofolate synthase | A5893_15765 | Not Available | Positive | 3703296 - 3704576 | 47320.8 |
| maltose acetyltransferase | A5893_15770 | Not Available | Positive | 3704588 - 3705142 | 20338.7 |
| transmembrane ion channel | A5893_15775 | Not Available | Positive | 3705283 - 3706935 | 62265.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
