Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_15575 | Not Available | Negative | 3663489 - 3664127 | 24046.3 |
| hypothetical protein | A5893_15580 | Not Available | Negative | 3664683 - 3665045 | 13559.7 |
| hypothetical protein | A5893_15585 | Not Available | Negative | 3665053 - 3666372 | 51254.4 |
| hypothetical protein | A5893_15590 | Not Available | Negative | 3666369 - 3667508 | 44128.2 |
| hypothetical protein | A5893_15595 | Not Available | Negative | 3667505 - 3667825 | 11394.8 |
| hypothetical protein | A5893_15600 | Not Available | Positive | 3667973 - 3668368 | 15477.7 |
| transcriptional repressor | A5893_15605 | Not Available | Positive | 3668456 - 3668935 | 18656.6 |
| adenylosuccinate synthase | A5893_15610 | Not Available | Positive | 3668971 - 3670245 | 47003.8 |
| 3-methyladenine dna glycosylase | A5893_15615 | Not Available | Negative | 3670418 - 3671017 | 22268.0 |
| general stress protein | A5893_15620 | Not Available | Negative | 3671084 - 3671635 | 20856.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
