Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination protein recr | A5893_15475 | Not Available | Negative | 3641390 - 3642007 | 22687.2 |
| sodium:solute symporter | A5893_15480 | Not Available | Positive | 3642081 - 3643583 | 55304.8 |
| tigr00730 family rossman fold protein | A5893_15485 | Not Available | Positive | 3643602 - 3644309 | 26925.4 |
| hypothetical protein | A5893_15490 | Not Available | Positive | 3644686 - 3645615 | 35625.0 |
| hypothetical protein | A5893_15495 | Not Available | Negative | 3645612 - 3646205 | 21891.2 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | A5893_15500 | Not Available | Negative | 3646215 - 3648668 | 92909.0 |
| recx family transcriptional regulator | A5893_15505 | Not Available | Positive | 3648718 - 3649197 | 18677.9 |
| Trna-gly | Not Available | Not Available | Positive | 3649291 - 3649363 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3649413 - 3649500 | Not Available |
| hypothetical protein | A5893_15520 | Not Available | Negative | 3649642 - 3651369 | 64925.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
