Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate--coa ligase subunit beta | A5893_15325 | Not Available | Positive | 3614285 - 3615475 | 42801.6 |
| hypothetical protein | A5893_15330 | Not Available | Negative | 3615556 - 3616038 | 17478.0 |
| hypothetical protein | A5893_15335 | Not Available | Negative | 3616149 - 3616439 | 10973.2 |
| hypothetical protein | A5893_15340 | Not Available | Positive | 3616483 - 3616950 | 17386.5 |
| asparagine--trna ligase | A5893_15345 | Not Available | Positive | 3617236 - 3618684 | 55296.0 |
| 8-amino-7-oxononanoate synthase | A5893_15350 | Not Available | Positive | 3618700 - 3619818 | 40916.4 |
| atp-dependent dethiobiotin synthetase biod | A5893_15355 | Not Available | Positive | 3619815 - 3620432 | 22888.8 |
| hypothetical protein | A5893_15360 | Not Available | Negative | 3620437 - 3620799 | 14262.4 |
| peptidase | A5893_15365 | Not Available | Negative | 3620799 - 3621581 | 30083.3 |
| rhodanese | A5893_15370 | Not Available | Positive | 3621700 - 3622194 | 19328.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
