Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydratase | A5893_15275 | Not Available | Positive | 3604016 - 3604846 | 31052.2 |
| 3-deoxy-7-phosphoheptulonate synthase | A5893_15280 | Not Available | Positive | 3604948 - 3606054 | 40831.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | A5893_15285 | Not Available | Positive | 3606054 - 3607292 | 45633.1 |
| chorismate synthase | A5893_15290 | Not Available | Positive | 3607530 - 3608618 | 39194.5 |
| hypothetical protein | A5893_15295 | Not Available | Positive | 3608651 - 3609010 | 14354.4 |
| peptidase s9 | A5893_15300 | Not Available | Negative | 3609017 - 3610996 | 74217.5 |
| hypothetical protein | A5893_15305 | Not Available | Positive | 3611191 - 3611922 | 27469.2 |
| spheroidene monooxygenase | A5893_15310 | Not Available | Positive | 3611992 - 3612687 | 26611.3 |
| hypothetical protein | A5893_15315 | Not Available | Positive | 3612743 - 3612988 | 9552.63 |
| hypothetical protein | A5893_15320 | Not Available | Positive | 3613394 - 3613978 | 23120.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
