Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase | A5893_15225 | Not Available | Positive | 3595192 - 3595827 | 24682.5 |
| epoxyqueuosine reductase | A5893_15230 | Not Available | Positive | 3595836 - 3596771 | 35813.6 |
| hypothetical protein | A5893_15235 | Not Available | Positive | 3596876 - 3597106 | 8706.74 |
| dihydrolipoyl dehydrogenase | A5893_15240 | Not Available | Positive | 3597353 - 3598756 | 50223.0 |
| fatty acid hydroxylase | A5893_15245 | Not Available | Positive | 3598912 - 3599301 | 15646.0 |
| udp-n-acetylenolpyruvoylglucosamine reductase | A5893_15250 | Not Available | Positive | 3599378 - 3600394 | 38027.5 |
| rna polymerase subunit sigma | A5893_15255 | Not Available | Positive | 3600655 - 3601194 | 20794.0 |
| proline dehydrogenase | A5893_15260 | Not Available | Negative | 3601205 - 3602395 | 45165.6 |
| rna-binding protein | A5893_15265 | Not Available | Positive | 3602484 - 3602690 | 7585.47 |
| 3-dehydroquinate synthase | A5893_15270 | Not Available | Positive | 3602687 - 3603748 | 39569.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
