Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna nucleotidyltransferase | A5893_01100 | Not Available | Negative | 290756 - 292168 | 53883.4 |
| translation factor sua5 | A5893_01105 | Not Available | Negative | 292239 - 292805 | 20935.0 |
| multidrug abc transporter atp-binding protein | A5893_01110 | Not Available | Negative | 292824 - 294647 | 66773.4 |
| hypothetical protein | A5893_01115 | Not Available | Negative | 294711 - 295226 | 19971.3 |
| hypothetical protein | A5893_01120 | Not Available | Negative | 295237 - 295515 | 10972.3 |
| hypothetical protein | A5893_01125 | Not Available | Negative | 295515 - 296291 | 29331.4 |
| phosphate starvation-inducible protein phoh | A5893_01130 | Not Available | Positive | 296393 - 297361 | 35666.4 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | A5893_01135 | Not Available | Positive | 297541 - 298485 | 35972.2 |
| anti-anti-sigma factor | A5893_01140 | Not Available | Positive | 298541 - 298918 | 14087.3 |
| ribonuclease z | A5893_01145 | Not Available | Positive | 298954 - 299865 | 34882.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
