Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | A5893_15175 | Not Available | Negative | 3585591 - 3586073 | 18782.1 |
| trna uridine(34) 5-carboxymethylaminomethyl synthesis gtpase mnme | A5893_15180 | Not Available | Negative | 3586128 - 3587495 | 50224.5 |
| hypothetical protein | A5893_15185 | Not Available | Positive | 3587702 - 3588070 | 14405.3 |
| hypothetical protein | A5893_15190 | Not Available | Positive | 3588145 - 3589398 | 49029.2 |
| hypothetical protein | A5893_15195 | Not Available | Positive | 3589518 - 3591110 | 61116.8 |
| hypothetical protein | A5893_15200 | Not Available | Positive | 3591118 - 3591819 | 27607.8 |
| Trna-arg | Not Available | Not Available | Positive | 3591894 - 3591970 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 3591974 - 3592050 | Not Available |
| transketolase | A5893_15215 | Not Available | Negative | 3592185 - 3594608 | 90323.0 |
| hypothetical protein | A5893_15220 | Not Available | Positive | 3594736 - 3595131 | 13981.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
