Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_15125 | Not Available | Positive | 3576545 - 3577147 | 22863.2 |
| hypothetical protein | A5893_15130 | Not Available | Negative | 3577359 - 3578903 | 54073.6 |
| trna 2-thiouridine(34) synthase mnma | A5893_15135 | Not Available | Positive | 3579156 - 3580244 | 40138.7 |
| hypothetical protein | A5893_15140 | Not Available | Positive | 3580403 - 3581077 | 25451.2 |
| hypothetical protein | A5893_15145 | Not Available | Positive | 3581146 - 3581775 | 24354.8 |
| atp-dependent endonuclease | A5893_15150 | Not Available | Negative | 3581772 - 3583190 | 53985.1 |
| hypothetical protein | A5893_15155 | Not Available | Positive | 3583428 - 3584243 | 31140.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | A5893_15160 | Not Available | Positive | 3584234 - 3584773 | 20482.7 |
| pantetheine-phosphate adenylyltransferase | A5893_15165 | Not Available | Positive | 3584794 - 3585258 | 17209.1 |
| hypothetical protein | A5893_15170 | Not Available | Negative | 3585284 - 3585616 | 12638.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
