Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | A5893_15070 | Not Available | Positive | 3565181 - 3565840 | 24272.8 |
| orotate phosphoribosyltransferase | A5893_15075 | Not Available | Positive | 3565843 - 3566238 | 14836.1 |
| hypothetical protein | A5893_15080 | Not Available | Positive | 3566238 - 3566654 | 16600.5 |
| molecular chaperone dnak | A5893_15085 | Not Available | Negative | 3566882 - 3568801 | 68543.0 |
| two-component system response regulator | A5893_15090 | Not Available | Positive | 3569375 - 3569767 | 14894.4 |
| hypothetical protein | A5893_15100 | Not Available | Negative | 3571012 - 3571590 | 21882.1 |
| hypothetical protein | A5893_15105 | Not Available | Negative | 3571640 - 3572698 | 38486.7 |
| hypothetical protein | A5893_15110 | Not Available | Negative | 3572701 - 3574683 | 75292.3 |
| hypothetical protein | A5893_15115 | Not Available | Positive | 3575027 - 3575404 | 14777.5 |
| dna polymerase iv | A5893_15120 | Not Available | Positive | 3575414 - 3576529 | 42045.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
