Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | A5893_15015 | Not Available | Negative | 3554483 - 3555403 | 34903.1 |
| hybrid sensor histidine kinase/response regulator | A5893_15020 | Not Available | Positive | 3555605 - 3558076 | 94641.8 |
| sigma-54-dependent fis family transcriptional regulator | A5893_15025 | Not Available | Negative | 3558061 - 3559389 | 49759.5 |
| hypothetical protein | A5893_15030 | Not Available | Negative | 3559481 - 3559792 | 11110.2 |
| biotin synthase | A5893_15035 | Not Available | Negative | 3560030 - 3561022 | 36932.7 |
| magnesium transporter | A5893_15040 | Not Available | Negative | 3561226 - 3562575 | 49581.8 |
| 50s ribosomal protein l21 | A5893_15050 | Not Available | Negative | 3563238 - 3563549 | 11441.0 |
| hypothetical protein | A5893_15055 | Not Available | Negative | 3563653 - 3564132 | 19047.5 |
| hypothetical protein | A5893_15060 | Not Available | Negative | 3564288 - 3564590 | 11178.5 |
| nudix hydrolase | A5893_15065 | Not Available | Negative | 3564580 - 3565182 | 23255.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
