Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-binding protein | A5893_14965 | Not Available | Positive | 3543407 - 3543631 | 8076.62 |
| hypothetical protein | A5893_14970 | Not Available | Negative | 3543635 - 3545755 | 81048.7 |
| dead/deah box helicase | A5893_14975 | Not Available | Positive | 3546038 - 3547165 | 42372.4 |
| hypothetical protein | A5893_14980 | Not Available | Positive | 3547206 - 3547937 | 28246.8 |
| dna-binding protein | A5893_14985 | Not Available | Positive | 3548188 - 3548640 | 17256.3 |
| atp-dependent dna ligase | A5893_14990 | Not Available | Negative | 3548765 - 3551239 | 94852.2 |
| ku protein | A5893_14995 | Not Available | Negative | 3551243 - 3552010 | 29351.5 |
| hypothetical protein | A5893_15000 | Not Available | Negative | 3552125 - 3552757 | 24557.4 |
| adenosylmethionine--8-amino-7-oxononanoate aminotransferase bioa | A5893_15005 | Not Available | Negative | 3552759 - 3554024 | 47478.1 |
| nudix hydrolase | A5893_15010 | Not Available | Negative | 3554032 - 3554481 | 17300.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
