Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate o-acetyltransferase | A5893_14915 | Not Available | Negative | 3527807 - 3529234 | 55149.5 |
| hypothetical protein | A5893_14920 | Not Available | Negative | 3529238 - 3530338 | 42630.5 |
| glycosyl transferase family 1 | A5893_14925 | Not Available | Negative | 3530341 - 3531549 | 46515.0 |
| hypothetical protein | A5893_14930 | Not Available | Negative | 3531621 - 3533114 | 56799.0 |
| hypothetical protein | A5893_14935 | Not Available | Negative | 3533257 - 3534423 | 44667.6 |
| lipopolysaccharide biosynthesis protein | A5893_14940 | Not Available | Negative | 3534424 - 3536625 | 84394.4 |
| hypothetical protein | A5893_14945 | Not Available | Negative | 3536625 - 3537314 | 26451.8 |
| hypothetical protein | A5893_14950 | Not Available | Positive | 3537718 - 3540258 | 89301.9 |
| hypothetical protein | A5893_14955 | Not Available | Positive | 3540264 - 3541193 | 34282.8 |
| hypothetical protein | A5893_14960 | Not Available | Positive | 3541203 - 3543305 | 78541.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
