Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | A5893_14815 | Not Available | Negative | 3508420 - 3509772 | 48934.4 |
| aaa family atpase | A5893_14820 | Not Available | Negative | 3509896 - 3510537 | 24358.9 |
| gnat family acetyltransferase | A5893_14825 | Not Available | Negative | 3510542 - 3510994 | 17820.4 |
| duf4442 domain-containing protein | A5893_14830 | Not Available | Negative | 3510995 - 3511480 | 18824.0 |
| aspartyl/glutamyl-trna amidotransferase subunit b | A5893_14835 | Not Available | Positive | 3511745 - 3513214 | 54896.9 |
| alkyl hydroperoxide reductase | A5893_14840 | Not Available | Positive | 3513211 - 3514329 | 42291.1 |
| dna-binding response regulator | A5893_14845 | Not Available | Positive | 3514451 - 3515137 | 25954.6 |
| valine--trna ligase | A5893_14850 | Not Available | Positive | 3515397 - 3518102 | 103454.0 |
| tat (twin-arginine translocation) pathway signal sequence containing protein | A5893_14855 | Not Available | Positive | 3518571 - 3519272 | 25053.6 |
| dessication-associated protein | A5893_14860 | Not Available | Positive | 3519283 - 3520131 | 29881.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
