Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | A5893_14765 | Not Available | Positive | 3497308 - 3497979 | 24513.9 |
| tonb-dependent receptor | A5893_14770 | Not Available | Positive | 3497993 - 3500416 | 91790.5 |
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | A5893_14775 | Not Available | Positive | 3500549 - 3501613 | 39051.9 |
| 3-phosphoglycerate dehydrogenase | A5893_14780 | Not Available | Positive | 3501636 - 3502583 | 33974.0 |
| hypothetical protein | A5893_14785 | Not Available | Negative | 3502877 - 3503308 | 16596.1 |
| hypothetical protein | A5893_14790 | Not Available | Negative | 3503357 - 3503836 | 17887.6 |
| short-chain dehydrogenase | A5893_14795 | Not Available | Negative | 3504023 - 3504757 | 26735.5 |
| phenylalanine 4-monooxygenase | A5893_14800 | Not Available | Negative | 3504759 - 3506531 | 67084.1 |
| abc transporter | A5893_14805 | Not Available | Positive | 3506770 - 3508017 | 45876.6 |
| hypothetical protein | A5893_14810 | Not Available | Negative | 3508018 - 3508386 | 14582.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
