Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | A5893_01050 | Not Available | Negative | 283827 - 284630 | 30349.0 |
| hypothetical protein | A5893_01055 | Not Available | Negative | 284631 - 284834 | 7864.29 |
| hypothetical protein | A5893_01060 | Not Available | Negative | 284827 - 285699 | 32659.7 |
| nitrogen fixation protein nifr | A5893_01065 | Not Available | Positive | 285814 - 286806 | 37558.4 |
| co2+/mg2+ efflux protein apag | A5893_01070 | Not Available | Positive | 286858 - 287244 | 14641.6 |
| hypothetical protein | A5893_01075 | Not Available | Negative | 287393 - 287929 | 19876.9 |
| hypothetical protein | A5893_01080 | Not Available | Positive | 288083 - 288397 | 11422.7 |
| hypothetical protein | A5893_01085 | Not Available | Positive | 288416 - 289084 | 25688.8 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | A5893_01090 | Not Available | Negative | 289068 - 289979 | 34826.6 |
| hypothetical protein | A5893_01095 | Not Available | Negative | 290111 - 290722 | 23754.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
