Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine transporter lyse | A5893_14610 | Not Available | Positive | 3468153 - 3468773 | 23283.4 |
| hypothetical protein | A5893_14615 | Not Available | Negative | 3468965 - 3470014 | 40571.6 |
| type i glyceraldehyde-3-phosphate dehydrogenase | A5893_14620 | Not Available | Positive | 3470126 - 3471139 | 36897.4 |
| gcn5 family acetyltransferase | A5893_14625 | Not Available | Positive | 3471132 - 3471566 | 16712.3 |
| zinc-binding dehydrogenase | A5893_14630 | Not Available | Negative | 3471670 - 3472641 | 35123.8 |
| hypothetical protein | A5893_14635 | Not Available | Positive | 3472628 - 3472807 | 6838.39 |
| hypothetical protein | A5893_14640 | Not Available | Positive | 3472832 - 3473308 | 18561.5 |
| hypothetical protein | A5893_14645 | Not Available | Negative | 3473477 - 3473863 | 14606.5 |
| 23s rrna (uracil-5-)-methyltransferase ruma | A5893_14650 | Not Available | Negative | 3473860 - 3475281 | 53997.0 |
| trna hydroxylase | A5893_14655 | Not Available | Positive | 3475682 - 3476275 | 22922.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
