Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3456486 - 3456562 | Not Available |
| adenylate kinase | A5893_14565 | Not Available | Positive | 3456625 - 3457197 | 20858.0 |
| gtpase obge | A5893_14570 | Not Available | Positive | 3457274 - 3458272 | 35865.6 |
| hypothetical protein | A5893_14575 | Not Available | Negative | 3458399 - 3462049 | 139910.0 |
| multidrug abc transporter atp-binding protein | A5893_14580 | Not Available | Negative | 3462060 - 3462947 | 32560.5 |
| lipid-a-disaccharide synthase | A5893_14585 | Not Available | Negative | 3463047 - 3464156 | 41973.5 |
| stationary phase survival protein sure | A5893_14590 | Not Available | Negative | 3464418 - 3464678 | 9939.57 |
| 5'/3'-nucleotidase sure | A5893_14595 | Not Available | Negative | 3464671 - 3465447 | 28596.2 |
| hypothetical protein | A5893_14600 | Not Available | Positive | 3465474 - 3467264 | 65961.7 |
| hypothetical protein | A5893_14605 | Not Available | Positive | 3467493 - 3468092 | 23318.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
