Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_14505 | Not Available | Positive | 3447585 - 3447785 | 7405.75 |
| glycosyl transferase | A5893_14510 | Not Available | Positive | 3447908 - 3448666 | 29238.1 |
| bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase ii | A5893_14520 | Not Available | Negative | 3449793 - 3451004 | 44535.9 |
| hypothetical protein | A5893_14525 | Not Available | Negative | 3451006 - 3452163 | 44772.6 |
| permease | A5893_14530 | Not Available | Negative | 3452156 - 3453595 | 54471.2 |
| hypothetical protein | A5893_14535 | Not Available | Negative | 3453615 - 3453998 | 14970.7 |
| Trna-met | Not Available | Not Available | Positive | 3454299 - 3454375 | Not Available |
| endonuclease | A5893_14545 | Not Available | Positive | 3454409 - 3454657 | 9783.84 |
| endonuclease | A5893_14550 | Not Available | Positive | 3454765 - 3455013 | 9834.02 |
| laci family transcriptional regulator | A5893_14555 | Not Available | Positive | 3455198 - 3456232 | 38633.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
