Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-galactopyranose mutase | A5893_14455 | Not Available | Negative | 3432155 - 3433423 | 49112.8 |
| hypothetical protein | A5893_14460 | Not Available | Negative | 3433430 - 3434314 | 34476.1 |
| hypothetical protein | A5893_14465 | Not Available | Negative | 3434316 - 3435584 | 46378.1 |
| abc transporter permease | A5893_14470 | Not Available | Negative | 3435906 - 3436766 | 32651.8 |
| hypothetical protein | A5893_14475 | Not Available | Negative | 3437051 - 3437959 | 34295.9 |
| hypothetical protein | A5893_14480 | Not Available | Negative | 3437960 - 3439777 | 69293.6 |
| antitermination protein nusg | A5893_14485 | Not Available | Negative | 3440222 - 3440734 | 19993.3 |
| hypothetical protein | A5893_14490 | Not Available | Negative | 3440811 - 3443204 | 90714.0 |
| hypothetical protein | A5893_14495 | Not Available | Negative | 3443206 - 3443982 | 28478.8 |
| hypothetical protein | A5893_14500 | Not Available | Positive | 3444142 - 3447534 | 120607.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
