Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | A5893_14250 | Not Available | Positive | 3392625 - 3393284 | 24501.7 |
| argininosuccinate synthase | A5893_14255 | Not Available | Positive | 3393334 - 3394536 | 44500.3 |
| n-acetyl-gamma-glutamyl-phosphate reductase | A5893_14260 | Not Available | Positive | 3394526 - 3395554 | 37300.0 |
| four helix bundle protein | A5893_14265 | Not Available | Positive | 3395579 - 3395941 | 13730.5 |
| acetylornithine aminotransferase | A5893_14270 | Not Available | Positive | 3395976 - 3397103 | 41172.5 |
| hypothetical protein | A5893_14275 | Not Available | Positive | 3397127 - 3397324 | 7254.71 |
| hypothetical protein | A5893_14280 | Not Available | Positive | 3397321 - 3397605 | 11374.7 |
| acetylornithine carbamoyltransferase | A5893_14285 | Not Available | Positive | 3397616 - 3398566 | 35227.2 |
| acetylglutamate kinase | A5893_14290 | Not Available | Positive | 3398647 - 3399510 | 31146.8 |
| pyrroline-5-carboxylate reductase | A5893_14295 | Not Available | Positive | 3399758 - 3400564 | 28505.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
