Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolyphosphatase | A5893_14200 | Not Available | Negative | 3385349 - 3386359 | 37840.4 |
| nucleoside-diphosphate kinase | A5893_14205 | Not Available | Positive | 3386469 - 3386888 | 15083.8 |
| hypothetical protein | A5893_14210 | Not Available | Positive | 3386965 - 3387150 | 7049.09 |
| rna-binding protein | A5893_14215 | Not Available | Negative | 3387151 - 3387441 | 11129.8 |
| dna recombination protein recf | A5893_14220 | Not Available | Negative | 3387428 - 3388540 | 43049.1 |
| hypothetical protein | A5893_14225 | Not Available | Positive | 3388738 - 3389412 | 25301.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | A5893_14230 | Not Available | Positive | 3389477 - 3389968 | 17528.0 |
| hypothetical protein | A5893_14235 | Not Available | Positive | 3390239 - 3390985 | 28509.7 |
| bacillithiol system protein ytxj | A5893_14240 | Not Available | Positive | 3390982 - 3391311 | 12634.2 |
| fatty acid desaturase | A5893_14245 | Not Available | Positive | 3391399 - 3392127 | 29502.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
