Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | A5893_01000 | Not Available | Positive | 277265 - 277525 | 9737.53 |
| beta-ketoacyl synthase | A5893_01005 | Not Available | Positive | 277526 - 278878 | 49106.3 |
| short-chain dehydrogenase | A5893_01010 | Not Available | Positive | 278875 - 279687 | 29519.5 |
| 4-phosphopantetheinyl transferase | A5893_01015 | Not Available | Positive | 279677 - 280081 | 15354.5 |
| antitoxin | A5893_01020 | Not Available | Positive | 280150 - 280650 | 19034.9 |
| res superfamily protein | A5893_01025 | Not Available | Positive | 280650 - 281108 | 17381.1 |
| alpha/beta hydrolase | A5893_01030 | Not Available | Positive | 281114 - 281941 | 31879.8 |
| glycerol acyltransferase | A5893_01035 | Not Available | Positive | 281931 - 282578 | 24980.4 |
| hypothetical protein | A5893_01040 | Not Available | Negative | 282575 - 282856 | 10603.3 |
| phosphatidylserine decarboxylase | A5893_01045 | Not Available | Negative | 283063 - 283728 | 25595.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
