Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | A5893_14100 | Not Available | Positive | 3364083 - 3364640 | 20547.2 |
| arsenate reductase | A5893_14105 | Not Available | Positive | 3364830 - 3365180 | 13498.1 |
| hypothetical protein | A5893_14110 | Not Available | Positive | 3365254 - 3365973 | 27273.0 |
| peptidase m1 | A5893_14115 | Not Available | Positive | 3366088 - 3368043 | 73626.4 |
| transcriptional regulator | A5893_14120 | Not Available | Positive | 3368297 - 3369226 | 35362.4 |
| dna ligase-associated dexh box helicase | A5893_14125 | Not Available | Negative | 3369471 - 3371984 | 94895.5 |
| dna-binding protein | A5893_14130 | Not Available | Negative | 3372171 - 3372527 | 13629.6 |
| addiction module toxin rele | A5893_14135 | Not Available | Negative | 3372533 - 3372826 | 11585.1 |
| dna polymerase v | A5893_14140 | Not Available | Negative | 3372886 - 3374229 | 51046.7 |
| Trna-arg | Not Available | Not Available | Positive | 3374491 - 3374565 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
