Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome assembly cofactor rimp | A5893_14045 | Not Available | Positive | 3347639 - 3348103 | 17221.8 |
| transcription termination/antitermination protein nusa | A5893_14050 | Not Available | Positive | 3348134 - 3349369 | 46704.5 |
| translation initiation factor if-2 | A5893_14055 | Not Available | Positive | 3349432 - 3352473 | 110318.0 |
| hypothetical protein | A5893_14060 | Not Available | Positive | 3352622 - 3354535 | 73034.9 |
| glyoxalase | A5893_14065 | Not Available | Positive | 3354726 - 3355103 | 14717.4 |
| dna-binding protein | A5893_14070 | Not Available | Positive | 3355158 - 3355979 | 32231.4 |
| nad-dependent dehydratase | A5893_14075 | Not Available | Positive | 3356070 - 3357026 | 35732.9 |
| hypothetical protein | A5893_14080 | Not Available | Positive | 3357103 - 3357492 | 14627.2 |
| cdp-alcohol phosphatidyltransferase | A5893_14085 | Not Available | Positive | 3357653 - 3358417 | 28917.0 |
| hypothetical protein | A5893_14090 | Not Available | Negative | 3358453 - 3362868 | 163874.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
