Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | A5893_13890 | Not Available | Positive | 3313653 - 3313889 | 8476.92 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | A5893_13895 | Not Available | Positive | 3313909 - 3315162 | 44507.1 |
| ribonuclease iii | A5893_13900 | Not Available | Positive | 3315216 - 3315944 | 27545.5 |
| glycine/betaine abc transporter atp-binding protein | A5893_13905 | Not Available | Positive | 3316023 - 3316973 | 35766.6 |
| abc transporter permease | A5893_13910 | Not Available | Positive | 3316960 - 3318525 | 57741.7 |
| lps export abc transporter periplasmic protein lptc | A5893_13915 | Not Available | Negative | 3318636 - 3319208 | 21669.0 |
| hypothetical protein | A5893_13920 | Not Available | Negative | 3319216 - 3320502 | 47531.3 |
| hypothetical protein | A5893_13925 | Not Available | Negative | 3320489 - 3321238 | 27785.3 |
| phosphoribosylformylglycinamidine synthase i | A5893_13930 | Not Available | Negative | 3321239 - 3321931 | 25143.2 |
| beta-carotene 15,15'-monooxygenase | A5893_13935 | Not Available | Negative | 3322028 - 3323008 | 38199.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
