Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | A5893_13790 | Not Available | Negative | 3295651 - 3297762 | 79378.1 |
| crossover junction endodeoxyribonuclease ruva | A5893_13795 | Not Available | Negative | 3297766 - 3298188 | 15595.2 |
| hypothetical protein | A5893_13800 | Not Available | Positive | 3298376 - 3299191 | 30644.0 |
| hypothetical protein | A5893_13805 | Not Available | Positive | 3299191 - 3299901 | 26078.5 |
| tryptophan 2,3-dioxygenase | A5893_13810 | Not Available | Positive | 3299962 - 3300918 | 37709.4 |
| branched chain amino acid aminotransferase | A5893_13815 | Not Available | Positive | 3300973 - 3302037 | 39104.7 |
| single-stranded dna-binding protein | A5893_13820 | Not Available | Negative | 3302191 - 3302532 | 12657.3 |
| hypothetical protein | A5893_13825 | Not Available | Positive | 3302763 - 3303260 | 18922.8 |
| hypothetical protein | A5893_13830 | Not Available | Positive | 3303411 - 3304712 | 51235.0 |
| hypothetical protein | A5893_13835 | Not Available | Positive | 3304869 - 3305462 | 22860.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
