Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-beta-d-heptose 1-phosphate adenosyltransferase | A5893_13740 | Not Available | Positive | 3283646 - 3284149 | 18414.2 |
| acyl-coa dehydrogenase | A5893_13745 | Not Available | Positive | 3284484 - 3285623 | 41586.0 |
| redoxin | A5893_13750 | Not Available | Positive | 3285746 - 3286990 | 46416.4 |
| hypothetical protein | A5893_13755 | Not Available | Positive | 3286996 - 3287430 | 16281.5 |
| aaa family atpase | A5893_13760 | Not Available | Positive | 3287473 - 3288717 | 46158.8 |
| pesticidal protein cry28aa | A5893_13765 | Not Available | Positive | 3288816 - 3290312 | 55352.4 |
| hypothetical protein | A5893_13770 | Not Available | Positive | 3290315 - 3292639 | 87375.8 |
| lysr family transcriptional regulator | A5893_13775 | Not Available | Negative | 3292716 - 3293639 | 34889.6 |
| hypothetical protein | A5893_13780 | Not Available | Positive | 3293758 - 3294021 | 10006.2 |
| phosphohydrolase | A5893_13785 | Not Available | Positive | 3294139 - 3295371 | 46651.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
