Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_00950 | Not Available | Positive | 268346 - 269416 | 39715.1 |
| transcriptional regulator | A5893_00955 | Not Available | Positive | 269677 - 270402 | 27290.1 |
| arylesterase | A5893_00960 | Not Available | Negative | 270475 - 271311 | 31007.0 |
| carbohydrate kinase | A5893_00965 | Not Available | Negative | 271409 - 272419 | 37799.0 |
| haloacid dehalogenase | A5893_00970 | Not Available | Positive | 272548 - 273243 | 26756.6 |
| hypothetical protein | A5893_00975 | Not Available | Positive | 273240 - 273758 | 20253.8 |
| mfs transporter | A5893_00980 | Not Available | Positive | 273755 - 274906 | 42485.9 |
| ribosome small subunit-dependent gtpase a | A5893_00985 | Not Available | Positive | 275002 - 275922 | 34212.1 |
| short-chain dehydrogenase | A5893_00990 | Not Available | Positive | 275991 - 276713 | 25954.6 |
| hypothetical protein | A5893_00995 | Not Available | Positive | 276714 - 277265 | 21087.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
