Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nif3-like dinuclear metal center hexameric protein | A5893_13640 | Not Available | Negative | 3262509 - 3263606 | 40783.1 |
| hypothetical protein | A5893_13645 | Not Available | Positive | 3263706 - 3265142 | 54625.0 |
| hypothetical protein | A5893_13650 | Not Available | Negative | 3265139 - 3265498 | 13663.9 |
| hypothetical protein | A5893_13655 | Not Available | Negative | 3265773 - 3266183 | 15403.4 |
| transcription-repair coupling factor | A5893_13660 | Not Available | Positive | 3266289 - 3269648 | 128580.0 |
| hypothetical protein | A5893_13665 | Not Available | Positive | 3269786 - 3269989 | 8027.33 |
| hypothetical protein | A5893_13670 | Not Available | Positive | 3269990 - 3270445 | 17348.7 |
| hypothetical protein | A5893_13675 | Not Available | Negative | 3270523 - 3270777 | 9244.27 |
| hypothetical protein | A5893_13680 | Not Available | Positive | 3271016 - 3271636 | 23651.8 |
| hypothetical protein | A5893_13685 | Not Available | Positive | 3271721 - 3273055 | 49494.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
