Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginase | A5893_13590 | Not Available | Negative | 3252581 - 3253762 | 44851.3 |
| nucleoside-diphosphate sugar epimerase | A5893_13595 | Not Available | Positive | 3253869 - 3254843 | 35769.1 |
| phosphoserine phosphatase | A5893_13600 | Not Available | Positive | 3254907 - 3256196 | 48775.3 |
| methyltransferase type 12 | A5893_13605 | Not Available | Negative | 3256227 - 3256922 | 26661.2 |
| naringenin-chalcone synthase | A5893_13610 | Not Available | Negative | 3256915 - 3258021 | 41040.1 |
| ubiquinone biosynthesis protein ubia | A5893_13615 | Not Available | Positive | 3258061 - 3258930 | 33112.1 |
| hypothetical protein | A5893_13620 | Not Available | Negative | 3258905 - 3259348 | 16988.3 |
| phosphohydrolase | A5893_13625 | Not Available | Negative | 3259349 - 3259996 | 24853.7 |
| hypothetical protein | A5893_13630 | Not Available | Negative | 3260193 - 3261674 | 56536.2 |
| hypothetical protein | A5893_13635 | Not Available | Negative | 3261760 - 3262509 | 28597.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
