Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | A5893_13535 | Not Available | Positive | 3240144 - 3240896 | 29122.1 |
| glutamine cyclotransferase | A5893_13540 | Not Available | Negative | 3240898 - 3241953 | 39453.7 |
| hypothetical protein | A5893_13550 | Not Available | Negative | 3242828 - 3243193 | 13990.5 |
| dna primase | A5893_13555 | Not Available | Negative | 3243193 - 3245112 | 72688.3 |
| serine protease | A5893_13560 | Not Available | Positive | 3245372 - 3246907 | 54206.7 |
| hypothetical protein | A5893_13565 | Not Available | Positive | 3246976 - 3247635 | 25117.7 |
| succinate dehydrogenase | A5893_13570 | Not Available | Positive | 3247750 - 3248520 | 29666.1 |
| succinate dehydrogenase | A5893_13575 | Not Available | Positive | 3248586 - 3250520 | 71554.0 |
| fumarate reductase | A5893_13580 | Not Available | Positive | 3250629 - 3251375 | 27045.3 |
| alkyl hydroperoxide reductase | A5893_13585 | Not Available | Negative | 3251453 - 3252580 | 41788.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
