Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase | A5893_13430 | Not Available | Positive | 3216142 - 3216645 | 18317.3 |
| nadh-quinone oxidoreductase subunit k | A5893_13435 | Not Available | Positive | 3216638 - 3216967 | 11886.0 |
| nadh-quinone oxidoreductase subunit l | A5893_13440 | Not Available | Positive | 3216984 - 3218885 | 68820.0 |
| nadh dehydrogenase | A5893_13445 | Not Available | Positive | 3218906 - 3220363 | 53914.1 |
| nadh dehydrogenase | A5893_13450 | Not Available | Positive | 3220372 - 3221754 | 50599.4 |
| alkaline phosphatase | A5893_13455 | Not Available | Positive | 3221807 - 3222472 | 25168.2 |
| inorganic pyrophosphatase | A5893_13460 | Not Available | Positive | 3222462 - 3223010 | 20889.1 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | A5893_13470 | Not Available | Positive | 3224353 - 3225054 | 26815.1 |
| hypothetical protein | A5893_13475 | Not Available | Positive | 3225150 - 3225794 | 24281.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | A5893_13480 | Not Available | Positive | 3225797 - 3226297 | 18994.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
