Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit a | A5893_13380 | Not Available | Positive | 3208312 - 3208686 | 14248.0 |
| nadh dehydrogenase | A5893_13385 | Not Available | Positive | 3208806 - 3209348 | 19651.8 |
| nadh dehydrogenase | A5893_13390 | Not Available | Positive | 3209348 - 3209851 | 19408.2 |
| nadh dehydrogenase | A5893_13395 | Not Available | Positive | 3209861 - 3211096 | 47010.3 |
| nadh-quinone oxidoreductase subunit e | A5893_13400 | Not Available | Positive | 3211089 - 3211604 | 19059.0 |
| hypothetical protein | A5893_13405 | Not Available | Positive | 3211686 - 3211868 | 7186.19 |
| nadh-quinone oxidoreductase subunit f | A5893_13410 | Not Available | Positive | 3211950 - 3213311 | 49048.1 |
| nadh dehydrogenase | A5893_13415 | Not Available | Positive | 3213457 - 3214461 | 37670.1 |
| nadh-quinone oxidoreductase subunit h | A5893_13420 | Not Available | Positive | 3214461 - 3215498 | 38525.9 |
| nadh-quinone oxidoreductase subunit i | A5893_13425 | Not Available | Positive | 3215536 - 3216060 | 20230.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
