Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen deaminase | A5893_13330 | Not Available | Positive | 3199005 - 3200597 | 59613.3 |
| delta-aminolevulinic acid dehydratase | A5893_13335 | Not Available | Positive | 3200707 - 3201675 | 36075.3 |
| glutamate-1-semialdehyde aminotransferase | A5893_13340 | Not Available | Positive | 3201761 - 3203083 | 48385.1 |
| two-component sensor histidine kinase | A5893_13345 | Not Available | Positive | 3203086 - 3203955 | 33101.4 |
| dna-binding response regulator | A5893_13350 | Not Available | Positive | 3203966 - 3204670 | 27333.1 |
| hypothetical protein | A5893_13355 | Not Available | Positive | 3204677 - 3204979 | 11205.2 |
| hypothetical protein | A5893_13360 | Not Available | Positive | 3204945 - 3205193 | 9161.21 |
| uroporphyrinogen decarboxylase | A5893_13365 | Not Available | Positive | 3205190 - 3206215 | 38297.6 |
| protoporphyrinogen ix oxidase | A5893_13370 | Not Available | Positive | 3206305 - 3206844 | 20653.3 |
| aminotransferase | A5893_13375 | Not Available | Positive | 3206889 - 3208145 | 45922.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
