Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase i | A5893_13230 | Not Available | Positive | 3176109 - 3177182 | 41292.9 |
| hypothetical protein | A5893_13235 | Not Available | Positive | 3177245 - 3177646 | 14780.2 |
| voltage-gated chloride channel protein | A5893_13240 | Not Available | Negative | 3177768 - 3179141 | 50064.0 |
| flavonol synthase | A5893_13245 | Not Available | Positive | 3179504 - 3180469 | 36207.6 |
| phosphoheptose isomerase | A5893_13250 | Not Available | Negative | 3180568 - 3181149 | 21368.7 |
| 6-phosphofructokinase | A5893_13255 | Not Available | Negative | 3181151 - 3182131 | 35367.3 |
| disulfide bond formation protein dsbd | A5893_13260 | Not Available | Negative | 3182128 - 3184203 | 76522.9 |
| biotin--[acetyl-coa-carboxylase] ligase | A5893_13265 | Not Available | Negative | 3184233 - 3185006 | 29109.3 |
| ribosome silencing factor rsfs | A5893_13270 | Not Available | Positive | 3185053 - 3185430 | 14362.9 |
| peptidase m41 | A5893_13275 | Not Available | Positive | 3185454 - 3187538 | 76825.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
