Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_13030 | Not Available | Positive | 3116063 - 3116548 | 18510.3 |
| hypothetical protein | A5893_13035 | Not Available | Positive | 3117458 - 3118003 | 21103.5 |
| hypothetical protein | A5893_13040 | Not Available | Positive | 3118053 - 3118988 | 34009.7 |
| glycosyl hydrolase | A5893_13045 | Not Available | Negative | 3119152 - 3120627 | 55875.8 |
| hypothetical protein | A5893_13050 | Not Available | Negative | 3120696 - 3122876 | 81892.6 |
| hypothetical protein | A5893_13055 | Not Available | Negative | 3122896 - 3124902 | 75078.1 |
| hypothetical protein | A5893_13060 | Not Available | Positive | 3125362 - 3125886 | 20295.4 |
| gmc family oxidoreductase | A5893_13065 | Not Available | Positive | 3125896 - 3127584 | 64100.1 |
| hypothetical protein | A5893_13070 | Not Available | Negative | 3127626 - 3127805 | 6896.44 |
| hypothetical protein | A5893_13075 | Not Available | Positive | 3127996 - 3128217 | 8652.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
