Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_12980 | Not Available | Negative | 3105237 - 3106292 | 40089.6 |
| hypothetical protein | A5893_12985 | Not Available | Negative | 3106378 - 3107916 | 59131.8 |
| hypothetical protein | A5893_12990 | Not Available | Negative | 3108038 - 3109522 | 54460.6 |
| l-sorbosone dehydrogenase | A5893_12995 | Not Available | Negative | 3109833 - 3111128 | 47082.3 |
| hypothetical protein | A5893_13000 | Not Available | Negative | 3111133 - 3112086 | 35667.0 |
| nucleoside hydrolase | A5893_13005 | Not Available | Negative | 3112083 - 3113030 | 35840.9 |
| hypothetical protein | A5893_13010 | Not Available | Negative | 3113280 - 3113780 | 19255.4 |
| short-chain dehydrogenase/reductase | A5893_13015 | Not Available | Negative | 3113823 - 3114638 | 30279.7 |
| merr family transcriptional regulator | A5893_13020 | Not Available | Positive | 3114732 - 3115097 | 14054.2 |
| hypothetical protein | A5893_13025 | Not Available | Positive | 3115174 - 3115989 | 32361.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
