Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_12880 | Not Available | Positive | 3077278 - 3078504 | 45225.5 |
| hypothetical protein | A5893_12885 | Not Available | Positive | 3078665 - 3080461 | 68159.3 |
| serine hydrolase | A5893_12890 | Not Available | Positive | 3080462 - 3081763 | 47566.7 |
| hypothetical protein | A5893_12895 | Not Available | Positive | 3081831 - 3082049 | 8283.98 |
| hypothetical protein | A5893_12900 | Not Available | Positive | 3082079 - 3082723 | 24723.5 |
| hypothetical protein | A5893_12905 | Not Available | Negative | 3084505 - 3084771 | 10003.7 |
| multidrug dmt transporter permease | A5893_12910 | Not Available | Negative | 3085393 - 3086394 | 35565.0 |
| ribokinase | A5893_12915 | Not Available | Negative | 3086398 - 3087321 | 32192.7 |
| hypothetical protein | A5893_12920 | Not Available | Negative | 3087692 - 3088291 | 23615.4 |
| glycosyl hydrolase | A5893_12925 | Not Available | Negative | 3088612 - 3090810 | 81297.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
