Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_12830 | Not Available | Negative | 3068129 - 3068665 | 20191.6 |
| beta-aspartyl-peptidase | A5893_12835 | Not Available | Positive | 3068910 - 3069968 | 37467.0 |
| cyanophycinase | A5893_12840 | Not Available | Positive | 3070016 - 3070828 | 30128.2 |
| alkylhydroperoxidase | A5893_12845 | Not Available | Negative | 3070886 - 3071239 | 13370.1 |
| hypothetical protein | A5893_12850 | Not Available | Positive | 3071526 - 3072929 | 54940.4 |
| phosphosulfolactate synthase | A5893_12855 | Not Available | Positive | 3073008 - 3073772 | 29033.8 |
| shikimate dehydrogenase | A5893_12860 | Not Available | Positive | 3073815 - 3074597 | 29266.5 |
| gliding motility lipoprotein gldd | A5893_12865 | Not Available | Positive | 3074668 - 3075249 | 22581.7 |
| alpha/beta hydrolase | A5893_12870 | Not Available | Positive | 3075262 - 3076572 | 48581.4 |
| mbl fold hydrolase | A5893_12875 | Not Available | Positive | 3076633 - 3077274 | 23688.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
