Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | A5893_12775 | Not Available | Negative | 3054779 - 3055399 | 23719.5 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | A5893_12780 | Not Available | Negative | 3055406 - 3056188 | 28557.4 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | A5893_12785 | Not Available | Negative | 3056185 - 3057597 | 52575.8 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | A5893_12790 | Not Available | Negative | 3057606 - 3058652 | 37701.4 |
| phosphohydrolase | A5893_12795 | Not Available | Negative | 3058716 - 3059936 | 46647.5 |
| two-component system response regulator | A5893_12800 | Not Available | Positive | 3060043 - 3061596 | 60554.6 |
| alanine dehydrogenase | A5893_12810 | Not Available | Positive | 3062270 - 3063481 | 44137.0 |
| ribonuclease bn | A5893_12815 | Not Available | Positive | 3063486 - 3064424 | 34256.9 |
| hypothetical protein | A5893_12820 | Not Available | Negative | 3064432 - 3065565 | 43550.5 |
| tonb-dependent receptor | A5893_12825 | Not Available | Negative | 3065625 - 3068027 | 88824.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
