Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_12675 | Not Available | Positive | 3035087 - 3035305 | 7687.16 |
| hypothetical protein | A5893_12680 | Not Available | Positive | 3035487 - 3036686 | 45334.0 |
| hypothetical protein | A5893_12685 | Not Available | Positive | 3036789 - 3037271 | 18029.8 |
| hypothetical protein | A5893_12690 | Not Available | Positive | 3037514 - 3038356 | 31352.8 |
| hypothetical protein | A5893_12695 | Not Available | Positive | 3038646 - 3040094 | 54565.9 |
| hypothetical protein | A5893_12700 | Not Available | Positive | 3040153 - 3041088 | 36871.4 |
| transglutaminase | A5893_12705 | Not Available | Positive | 3041110 - 3042060 | 36433.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | A5893_12710 | Not Available | Negative | 3042189 - 3044120 | 70930.5 |
| hypothetical protein | A5893_12715 | Not Available | Negative | 3044320 - 3044508 | 6989.01 |
| abc transporter atp-binding protein | A5893_12720 | Not Available | Negative | 3044526 - 3046292 | 65880.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
