Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | A5893_00850 | Not Available | Negative | 252070 - 252594 | 19832.7 |
| hypothetical protein | A5893_00855 | Not Available | Negative | 252701 - 252994 | 11371.8 |
| hypothetical protein | A5893_00860 | Not Available | Negative | 253019 - 253444 | 16509.3 |
| hypothetical protein | A5893_00865 | Not Available | Negative | 253704 - 254084 | 13780.6 |
| hypothetical protein | A5893_00870 | Not Available | Positive | 254307 - 255038 | 28016.6 |
| hypothetical protein | A5893_00875 | Not Available | Negative | 255102 - 255707 | 23410.0 |
| phage tail protein | A5893_00880 | Not Available | Negative | 255711 - 256166 | 16966.3 |
| transposase | A5893_00885 | Not Available | Negative | 256334 - 256888 | 21846.3 |
| hypothetical protein | A5893_00890 | Not Available | Positive | 257369 - 258271 | 32981.5 |
| hypothetical protein | A5893_00895 | Not Available | Negative | 258726 - 259700 | 38159.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
