Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine--trna ligase | A5893_12575 | Not Available | Negative | 3011802 - 3013073 | 47548.3 |
| rrna (cytidine-2'-o-)-methyltransferase | A5893_12580 | Not Available | Positive | 3013158 - 3013871 | 26963.8 |
| apolipoprotein n-acyltransferase | A5893_12585 | Not Available | Positive | 3013868 - 3015529 | 63540.8 |
| carbon-nitrogen hydrolase | A5893_12590 | Not Available | Negative | 3015748 - 3017286 | 58784.2 |
| hypothetical protein | A5893_12595 | Not Available | Negative | 3017354 - 3018145 | 28519.7 |
| peptide deformylase | A5893_12600 | Not Available | Positive | 3018257 - 3018826 | 21760.3 |
| hypothetical protein | A5893_12605 | Not Available | Negative | 3018831 - 3019457 | 23565.5 |
| hypothetical protein | A5893_12610 | Not Available | Negative | 3019527 - 3019817 | 10497.8 |
| atp-binding protein | A5893_12615 | Not Available | Negative | 3019853 - 3020926 | 38199.5 |
| penicillin-binding protein | A5893_12620 | Not Available | Positive | 3021051 - 3023195 | 81028.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
