Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein mutt | A5893_12520 | Not Available | Negative | 3002709 - 3003101 | 15028.5 |
| hypothetical protein | A5893_12525 | Not Available | Negative | 3003309 - 3004253 | 36248.7 |
| hypothetical protein | A5893_12530 | Not Available | Negative | 3004465 - 3005073 | 23346.9 |
| hypothetical protein | A5893_12535 | Not Available | Negative | 3005074 - 3006036 | 35718.9 |
| hypothetical protein | A5893_12540 | Not Available | Negative | 3006041 - 3006577 | 20598.8 |
| short-chain dehydrogenase | A5893_12545 | Not Available | Negative | 3006598 - 3007299 | 25592.3 |
| abc transporter permease | A5893_12550 | Not Available | Positive | 3007382 - 3008116 | 25802.3 |
| abc transporter atp-binding protein | A5893_12555 | Not Available | Positive | 3008113 - 3008865 | 28061.0 |
| oxidoreductase | A5893_12560 | Not Available | Positive | 3009075 - 3009965 | 33807.7 |
| hypothetical protein | A5893_12565 | Not Available | Positive | 3010029 - 3011078 | 39411.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
