Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl endopeptidase | A5893_12415 | Not Available | Positive | 2964328 - 2966484 | 80233.2 |
| hypothetical protein | A5893_12420 | Not Available | Negative | 2967061 - 2967282 | 8218.23 |
| hypothetical protein | A5893_12425 | Not Available | Positive | 2967319 - 2973432 | 205100.0 |
| hypothetical protein | A5893_12430 | Not Available | Positive | 2973719 - 2975443 | 67079.2 |
| hypothetical protein | A5893_12435 | Not Available | Positive | 2975746 - 2982711 | 241871.0 |
| dna mismatch repair protein mutt | A5893_12440 | Not Available | Positive | 2982813 - 2983361 | 20819.8 |
| glycerol acyltransferase | A5893_12445 | Not Available | Positive | 2983377 - 2984120 | 28221.9 |
| dna mismatch repair protein mutl | A5893_12450 | Not Available | Positive | 2984510 - 2986384 | 70482.5 |
| rhomboid family intramembrane serine protease | A5893_12455 | Not Available | Positive | 2986388 - 2987209 | 31448.5 |
| rhomboid family intramembrane serine protease | A5893_12460 | Not Available | Positive | 2987220 - 2988101 | 33086.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
