Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp synthase | A5893_12365 | Not Available | Positive | 2952624 - 2953613 | 35690.7 |
| acetyl-coa carboxylase, biotin carboxyl carrier protein | A5893_12370 | Not Available | Positive | 2953679 - 2954167 | 17710.0 |
| acetyl-coa carboxylase biotin carboxylase subunit | A5893_12375 | Not Available | Positive | 2954251 - 2955597 | 49607.5 |
| preprotein translocase subunit tatc | A5893_12380 | Not Available | Positive | 2955664 - 2956539 | 32934.1 |
| hypothetical protein | A5893_12385 | Not Available | Positive | 2956796 - 2958772 | 72977.5 |
| histidine kinase | A5893_12390 | Not Available | Negative | 2958834 - 2959262 | 16212.0 |
| epimerase | A5893_12395 | Not Available | Negative | 2959359 - 2960804 | 55183.4 |
| abc transporter | A5893_12400 | Not Available | Positive | 2961034 - 2962269 | 43912.2 |
| hypothetical protein | A5893_12405 | Not Available | Negative | 2962273 - 2963007 | 28458.7 |
| hypothetical protein | A5893_12410 | Not Available | Positive | 2963082 - 2964065 | 38462.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
