Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A5893_12315 | Not Available | Negative | 2944832 - 2945806 | 37488.1 |
| crossover junction endodeoxyribonuclease ruvc | A5893_12320 | Not Available | Positive | 2945858 - 2946424 | 20666.4 |
| hit family hydrolase | A5893_12325 | Not Available | Negative | 2946547 - 2946939 | 14515.9 |
| transcription elongation factor grea | A5893_12330 | Not Available | Negative | 2947020 - 2947493 | 17139.7 |
| phosphoglycerate dehydrogenase | A5893_12335 | Not Available | Negative | 2947629 - 2948555 | 34867.2 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | A5893_12340 | Not Available | Negative | 2948597 - 2949385 | 29868.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | A5893_12345 | Not Available | Positive | 2949491 - 2950546 | 38731.3 |
| hypothetical protein | A5893_12350 | Not Available | Positive | 2950746 - 2951276 | 20240.8 |
| 50s ribosomal protein l32 | A5893_12355 | Not Available | Positive | 2951288 - 2951479 | 7317.85 |
| phosphate acyltransferase | A5893_12360 | Not Available | Positive | 2951667 - 2952608 | 34082.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
