Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychrophilus |
| Strain | CCM 8644 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1351125 bp
Thymine Count
1346521 bp
Guanine Count
659669 bp
Cytosine Count
641821 bp
Genome Length
3999136 bp
Protein-coding Genes
3389 genes
Non-Coding Genes
40 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein t | A5893_12265 | Not Available | Negative | 2933030 - 2934112 | 39631.3 |
| glycosyl transferase family 4 | A5893_12270 | Not Available | Negative | 2934177 - 2935385 | 46355.4 |
| ribonuclease hii | A5893_12275 | Not Available | Negative | 2935400 - 2935996 | 22780.5 |
| hypothetical protein | A5893_12280 | Not Available | Negative | 2936085 - 2937215 | 43298.7 |
| hypothetical protein | A5893_12285 | Not Available | Positive | 2937307 - 2938743 | 54979.6 |
| hypothetical protein | A5893_12290 | Not Available | Positive | 2938793 - 2939884 | 41147.5 |
| hypothetical protein | A5893_12295 | Not Available | Positive | 2939888 - 2941300 | 53440.1 |
| serine/threonine protein phosphatase | A5893_12300 | Not Available | Negative | 2941293 - 2942543 | 47800.6 |
| peptide transporter | A5893_12305 | Not Available | Negative | 2942598 - 2943707 | 41007.0 |
| glycosyl transferase | A5893_12310 | Not Available | Negative | 2943718 - 2944851 | 42973.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
